International Journal of Biomedical and Clinical Sciences
Articles Information
International Journal of Biomedical and Clinical Sciences, Vol.4, No.3, Sep. 2019, Pub. Date: Sep. 6, 2019
Recurrent Active Tuberculosis Prediction Using a Long Short-Term Memory Network
Pages: 80-87 Views: 1219 Downloads: 243
Authors
[01] Jabusile Madondoro, Tuberculosis Laboratory, Mpilo National and Referral Hospital, Bulawayo, Zimbabwe.
[02] Kernan Mzelikahle, Computer Science Department, National University of Science and Technology, Bulawayo, Zimbabwe.
[03] Dumisani John Hlatywayo, Applied Physics Department, National University of Science and Technology, Bulawayo, Zimbabwe.
[04] John Trimble, Industrial Engineering Department, Tshwane University of Technology, Tshwane, South Africa.
Abstract
Tuberculosis infections that occur both within the medical facility environments and general population have long been attributed to unrecognised strains of the bacteria and to previously unsuccessful treatment. Identifying active pulmonary TB, for both the initial activation of the disease and recurring disease, is very crucial in breaking the transmission cycle of the disease, particularly in low resourced countries of the developing world. In this paper, a Long Short-Term Memory (LSTM) network was adopted for use by training it using radiological data and other admission specific data into a medical facility. This data is usually made available upon a patient’s presentation onto a medical facility by the patient themselves, or through access to historical data. The objective of the LSTM network in this study is to complement the physician’s expert opinion on point of presentation of the patient into a medical facility. This study was set up as a non-concurrent prospective study, using data from the National Tuberculosis Laboratory at Mpilo Hospital in Bulawayo, Zimbabwe. Participants were identified through access to laboratory historical data, and the participates were divided into two groups. The first group is referred to as a derivation group and had a total of 5630 isolated instances of suspected active pulmonary TB. The second group was identified as the validation group and had a total of 1388 isolated instances of suspected active pulmonary TB as was determined at the point of presentation. The Long Short-Term Memory (LSTM) network was adopted and employed to predict active recurrent TB cases given the data available on point of presentation. The results of the LSTM prediction were contrasted with both the physicians’ assessments and results of subsequent investigations. The accuracy of both the physicians’ assessments and LSTM predictions were measured by calculating a c-index based on the area under the receiver operating characteristics curve. The results of this process indicate that the LSTM network significantly outperformed the physicians’ assessments, with calculated c-indices of 0.947 ± 0.028 and 0.61 ± 0.045, respectively (p < 0.05). By applying the LSTM network to the validation group, similar results are obtained where the corresponding c-indices were 0.923 ± 0.056 and 0.716 ± 0.095, respectively. In conclusion, the LSTM network was shown to have higher potential in identifying patients with recurring pulmonary TB, more accurately than physicians’ clinical assessment. This property may prove useful in low resourced countries where health facilities have very high doctor-patient-ratios.
Keywords
Artificial Neural Networks, Tuberculosis, Active Tuberculosis, Recurrent Tuberculosis, Long Short-Term Memory Network
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