International Journal of Plant Science and Ecology
Articles Information
International Journal of Plant Science and Ecology, Vol.1, No.3, Jun. 2015, Pub. Date: Apr. 21, 2015
Screening of Barley Genotypes for Drought Tolerance Using Molecular Markers
Pages: 88-92 Views: 5198 Downloads: 1903
Authors
[01] M. Huseynova, Institute of Botany, Azerbaijan National Academy of Sciences, 40 Badamdar Highway, Baku AZ, Azerbaijan.
[02] S. M. Rustamova, Institute of Botany, Azerbaijan National Academy of Sciences, 40 Badamdar Highway, Baku AZ, Azerbaijan.
[03] M. Y. Nasrullayeva, Institute of Genetic Reseourses, Azerbaijan National Academy of Sciences, 155 Azadliq Avenue, Baku AZ, Azerbaijan.
[04] J. A. Aliyev, Institute of Botany, Azerbaijan National Academy of Sciences, 40 Badamdar Highway, Baku AZ, Azerbaijan.
Abstract
Drought is one of the most important abiotic factors constraining barley production. Drought tolerance of 32 barley (Hordeum vulgare L.) samples of different varieties (21 genotypes-Nutans, 11-Pallidum) and origin have been analyzed with the method of RAPD-PCR. Oligomeric decamer RAPD primers (5′ TCGGCGGTTC 3′) and Р7 (5′ TCGGCGGTTC 3′), associated with drought tolerance have been used. RAPD PCR using P6 marker revealed characteristic loci at 920 bp region in 75% of genotype electrophoretic profiles. Loci were detected at 750 bp region in 78% of the analyzed barley genotypes when using RAPD P7 marker. Comparative analysis of the RAPD spectra showed that characteristic for both markers fragments had been synthesized in 59% of the genotypes (or 19 genotypes). This confirms an existence of a special locus associated with drought tolerance in the barley genotypes. In 6% (2 genotypes) of the studied genotypes characteristic amplification fragments have not been identified with both markers.
Keywords
Hordeum vulgare L., Drought, PCR, RAPD Markers
References
[01] Ajalli J. and Salehi M. (2012) Evaluation of drought stress indices in barley (Hordeum vulgare L.). Ann. Biol. Res., 3: 5515-5520.
[02] Akash M.W. (2013) Development of SCAR markers for molecular tagging of drought tolerance QTL in barley. Life Sci. J., 10(12s).
[03] Altinkut A., Kazan K., Gozukirmizi N. (2003) AFLP marker linked to water-stress-tolerant bulks in barely (Hordeum vulgare L.). Genet. Mol. Biol., 26(1): 77-82.
[04] Bohnert H.J. and Jensen R.G. (1996) Strategies for engineering waterstress tolerance in plants. Trends in Biotech., 14: 89-97.
[05] Budak H., Akpinar B.A., Unver T., Turktas M. (2013) Proteome changes in wild and modern wheat leaves upon drought stress by two-dimensional electrophoresis and nanolc-esi–ms/ms. Plant Mol. Biol. : 1-15.
[06] Harwood V.J., Brownell M., Wang S., Lepo J., Ellender R.D., Ajidahun A., Hellein K.N., Kennedy E., Ye X., Flood C. (2009). Validation and field testing of libraryindependent microbial source tracking methods in the Gulf of Mexico. Water Res., 43(19): 4812–9.
[07] Manavalan L.P., Guttikonda S.K., Tran L.S., Nguyen H.T. (2009) Physiological and molecular approaches to improve drought resistance in soybean. Plant Cell Physiol., 50(7):1260-1276.
[08] Mayer K.F., Waugh R., Brown J.W., Schulman A., Langridge P., Platzer M., Fincher G.B., Muehlbauer G.J., Sato K., Close T.J., Wise R.P., Stein N. (2012) A physical, genetic and functional sequence assembly of the barley genome. Nature, 491:711-716.
[09] Murray M.G., Thompson W.F. (1980) Rapid isolation of high molecular weight plant DNA. Nucleic Acids Res., 8:4321-4325.
[10] Nevo E., Fu Y.B., Pavlicek T., Khalifa S., Tavasi M., Beiles A. (2012) Evolution of wild cereals during 28 years of global warming in Israel. Proc. Natl. Acad. Sci. USA, 109:3412-5. doi: 10.1073/pnas.1121411109.
[11] Pakniyat H., Tavakol E. (2007) RAPD markers associated with drought tolerance in bread wheat (Triticum aestivum L.). Pakistan J. Biol. Sci., 10: 3237-3239.
[12] Rampino P., Pataleo S., Gerardi C., Perotta C. (2006) Drought stress responses in wheat: physiological and molecular analysis of resistant and sensitive genotypes. Plant Cell Environ, 29: 2143-2152.
[13] Reynolds M. P. (2006) “Drought adaptation in wheat,” in Drought Tolerance in Cereals. J. M. Ribaut, Ed., chapter 11, pp. 402-436, Haworth’s Food Products Press, New York, NY, USA.
[14] Salamini F., Ozkan H., Brandolini A., Schafer-Pregl R., Martin W. (2002) Genetics and geography of wild cereal domestication in the Near East. Nat. Rev. Genet., 3: 429–441.
[15] Sreenivasulu N., Usadel B., Winter A., Radchuk V., Scholz ., Stein N., Barley grain maturation and germination: metabolic pathway and regulatory network commonalities and differences highlighted by new MapMan/PageMan profiling tools. Plant physiology, 146(4):1738-1758.
[16] Tran L.S., Nakashima K., Shinozaki K., Yamaguchi-Shinozaki K. (2007) Plant gene networks in osmotic stress response: from genes to regulatory networks. Meth. in Enzymol., 428: 109-128.
[17] Valliyodan B. and Nguyen H.T. (2006) Understanding regulatory networks and engineering for enhanced drought tolerance in plants. Curr. Opin. Plant Biol., 9: 189-195.
[18] Varshney R.K., Beier U., Khlestkina E., Kota R., Korzun V., Röder M., Graner A., Börner A. (2007) Single nucleotide polymorphisms in rye: discovery, frequency and applications for genome mapping and diversity studies. Theoret. and Appl. Gen., 114: 1105-1116.
[19] Williams J.G., Kubelik K.J., Livak J.A., Tingey S.V. (1990) DNA polymorphisms amplified by arbitrary primers are useful genetic markers. Nucleic Acids Res., 18: 6531-6535.
[20] WitcombeJ. R, Hollington P.A, Howarth C. J,ReaderS,SteeleK.A. (2008)Breeding for abiotic stresses for sustainable agriculture.Phil. Trans. R. Soc. B.,363:703-716.
[21] Yamaguchi-Shinozaki K., Shinozaki K. (2006) Transcriptional regulatory networks in cellular responses and tolerance to dehydration and cold stresses. Annu. Rev. Plant Biol., 57: 781-803.
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